第 3 季 共 26 集
播出时间：1994年9月27日
第 1 集 The Search (1)
播出时间：1994年9月27日
Instead of waiting for the Jem'Hadar to attack, Sisko wants to try a different approach. He wants to take a new class starship to try to find the Founders.
第 2 集 The Search (2)
播出时间：1994年10月4日
Odo has found his home and is introduced. Meanwhile Sisko finds out peace talks between the Dominion and the Federation have already started.
第 3 集 The House of Quark
播出时间：1994年10月11日
Quark is forced to marry a Klingon widow after he takes credit for the accidental death of her husband, the head of a powerful Klingon House.
第 4 集 Equilibrium
播出时间：1994年10月18日
The Trill homeworld is the setting, as Sisko and Bashir take Jadzia home for treatment when she begins experiencing hallucinations after playing a tune she can't recall.
第 5 集 Second Skin
播出时间：1994年10月25日
Kira finds herself on Cardassia as a Cardassian. She is told she is called Iliana Ghemor and was a Cardassian spy.
第 6 集 The Abandoned
播出时间：1994年11月1日
Odo tries to change the nature of a Jem'Hadar boy that Quark finds, while Sisko tries to break his son's relationship with a 20 year old Dabo girl.
第 7 集 Civil Defense
播出时间：1994年11月8日
The station goes into lockdown and the crew is endangered when an old Cardassian security program is accidentally activated.
第 8 集 Meridian
播出时间：1994年11月15日
Dax falls in love with one of the residents of a multi-dimensional planet, while on DS9 an alien requests a holosuite program of Kira from Quark.
第 9 集 Defiant
播出时间：1994年11月22日
Thomas Riker, impersonating Will Riker, steals the Defiant in order to fight with the Maquis. Sisko assist Gul Dukat on Cardassia Prime in stopping the ship entering Cardassian territory.
第 10 集 Fascination
播出时间：1994年11月29日
As Lwaxanna Troi visits the station for a Bajoran festival, the crew is stricken with intense romantic attractions to one another.
第 11 集 Past Tense (1)
播出时间：1995年1月3日
Sisko, Bashir and Dax are accidentally sent to San Francisco in the 21st century due to a transporter malfunction, and must figure out how to get back to return without changing the time line.
第 12 集 Past Tense (2)
播出时间：1995年1月10日
Sisko is forced to take the place of a key historical figure on Earth in 2024 in order to preserve the timeline.
第 13 集 Life Support
播出时间：1995年1月31日
Dr. Bashir must use extraordinary measures to prolong Vedek Bareil's life long enough to allow Bareil to complete sensitive peace negotiations between the Bajorans and the Cardassians.
第 14 集 Heart of Stone
播出时间：1995年2月7日
After chasing a fugitive into a cave, Kira gets stuck and is slowly encapsulated by a growing crystal stone while Odo tries to figure out how to free her.
第 15 集 Destiny
播出时间：1995年2月14日
Sisko faces a conflict between his Starfleet duties and his role as the Bajoran Emissary when an ancient Bajoran prophecy predicts that a joint Federation-Cardassian project will lead to the destruction of the wormhole.
第 16 集 Prophet Motive
播出时间：1995年2月21日
Grand Nagus Zek is acting bizarre by giving away money and rewriting the Rules of Acquisition. Quark attempts to get the old Nagus back.
第 17 集 Visionary
播出时间：1995年2月28日
While a Romulan delegation tries to get information about the Dominion, O'Brien gets visions of unpleasant things that are about to happen in the future.
第 18 集 Distant Voices
播出时间：1995年4月11日
After being attacked in the infirmary, Dr. Bashir has a dual mystery on his hands: what has happened to the station while he was out and why is he aging so rapidly now?
第 19 集 Through the Looking Glass
播出时间：1995年4月18日
Sisko is kidnapped to impersonate his deceased, mirror universe self to gain Jennifer Sisko's loyalty in the Rebel Alliance.
第 20 集 Improbable Cause (1)
播出时间：1995年4月25日
After an attempt is made on Garak's life, Odo conducts the investigation on who tried to murder the Cardassian tailor - and why.
第 21 集 The Die Is Cast (2)
播出时间：1995年5月2日
Now rejoined with his former mentor, Garak is ordered to interrogate Odo about the secrets of his people, while the joined Romulan/Cardassian attack fleet moves towards the Founders' home world on a mission of destruction.
第 22 集 Explorers
播出时间：1995年5月9日
Sisko rebuilds an ancient Bajoran space vessel from the blueprints, and he and Jake take the ship on a trip, attempting to prove that the ancient Bajorans went beyond their solar system without warp drive.
第 23 集 Family Business
播出时间：1995年5月16日
Quark and Rom return to the Ferengi home world because their mother has broken the law - by wearing clothes and earning profits, forbidden for women in Ferengi society.
第 24 集 Shakaar
播出时间：1995年5月23日
News arrives that Kai Winn has also become Bajor's political leader. She asks Kira to negotiate with an old resistance friend about returning soil reclamators.
第 25 集 Facets
播出时间：1995年6月13日
Dax asks the crew to join her Zhian'tara ritual. The memories of her former hosts will take over their bodies. Nog is preparing for Starfleet Academy.
第 26 集 The Adversary
播出时间：1995年6月20日
The Defiant is off to show the Federation's presence to the new Tzenkethi government. While underway the ship malfunctions and Bashir is suspected of sabotage.
