第 3 季 共 15 集
播出时间：2007年9月26日
第 1 集 The Widow's Son in the Windshield
播出时间：2007年9月26日
After a skull smashes into the windshield of a teenager's car, the investigation reveals the skull has been gnawed on by human teeth, which implies cannibalism and marks the beginning of the Widow's Son case. Meanwhile, Angela and Hodgins hire a private investigator to find her husband. Bones searches for Zach's replacement and the team gets a wonderful surprise.
第 2 集 Soccer Mom in the Mini-Van
播出时间：2007年10月3日
Brennan and Booth investigate the death of a soccer mom who was blown up in her mini-van. They soon discover that the victim was part of a group of radicals from the 70's, adding several names to the list of possible suspects.
第 3 集 Death in the Saddle
播出时间：2007年10月10日
Things get kinky when Booth and Brennan follow murder clues that lead to a lodge used as an S&M retreat for "jockeys" and their "horses." Meanwhile, Angela tries hypnosis in an effort to figure out her elusive husband's name so she can finally divorce him.
第 4 集 The Secret in the Soil
播出时间：2007年10月24日
When a body that appears to be cooked is discovered, the clues lead Booth and Bones to an organic farm co-op. Meanwhile, the two of them must meet with Lance Sweets, an FBI psychologist who must determine if they should continue to work together.
第 5 集 Mummy in the Maze
播出时间：2007年10月31日
On Halloween, two mummified bodies are discovered and found to be people reported missing the past two Halloweens. When Booth and Bones learn about a missing girl, linked to the suspect of the previous murders, the race is on to save her life.
第 6 集 Intern in the Incinerator
播出时间：2007年11月7日
The team suspect their own colleagues after the burnt remains of an intern at the Jeffersonian are discovered. Meanwhile, Booth poses as Cam's boyfriend at her family get-together.
第 7 集 Boy in the Time Capsule
播出时间：2007年11月14日
On the 20th anniversary, the Foothill High School, class of '87 alumni unearth the time capsule they buried to discover the remains of one of their classmates inside. Booth and Bones investigate the past lives of his classmates in an effort to discover the truth.
第 8 集 The Knight on the Grid
播出时间：2007年11月21日
After the body of an archbishop is found, missing the kneecaps, the team concludes the murder is related to the Widow's Son case.
第 9 集 The Santa in the Slush
播出时间：2007年11月28日
Booth and Brennan investigate a mall Santa named Kris Kringle who was found dead by two elves. A series of clues makes the murdered mall Santa seem like he's the real deal.
第 10 集 The Man in the Mud
播出时间：2008年4月15日
A body discovered in a hot spring turns out to be that of Tripp Goddard, a sexy motorcycle racer who had disappeared two weeks earlier. Sweets talks Booth and Bones into going out with him and his girlfriend.
第 11 集 Player Under Pressure
播出时间：2008年4月22日
All team members are working to identify the bones from a college athlete who suffered a lot of fractures. After the body is identified they talk to his sister and somebody who acted as a sort of an adviser for the deceased. Angela and Hodgins have an important talk. Zack is overwhelmed by having to reconstruct the crushed bones to form a skeleton.
第 12 集 The Baby in the Bough
播出时间：2008年4月29日
A woman's car is run off the road and she is killed, but her baby miraculously survives the accident. Booth and Brennan go to the woman's hometown to try to find out who's responsible for running her car off the road. Bones, with help from Booth, takes care of the baby until the team finds out who killed the mother.
第 13 集 The Verdict in the Story
播出时间：2008年5月6日
Brennan's father Max Keenan is on trial for the alleged murder of FBI Deputy Director Kirby. Everyone on the team, except for Brennan, is called as a witness for the prosecution during the trial. Brennan on the other hand is the forensics advisor for the defense, and she must rely on both her dedication to her family and her skill as an anthropologist to help free her father.
第 14 集 The Wannabe in the Weeds
播出时间：2008年5月13日
A wannabe singer Tommy Sour was found on a grassy location. The investigation leads Brennan, Booth, and Cam to the Checker Box Restaurant where Tommy used to sing. There are several suspects who took part in the open mike contest there, with talent scouts in the audience. The group comes together with a startling revelation for Brennan.
第 15 集 The Pain in the Heart
播出时间：2008年5月20日
The Gormogon serial killer is back again, and the silver skeleton from the basement vault has gone missing. All the Jeffersonian employees become suspects, with the scary possibility that one of their own is working with Gormogon.
